Bachelot, A. and Binart, N. (2007). Reproductive role of prolactin. Reproduction Review. 133: 361-369.
Cole, J.B., Lewis, R.M., Maltecca, C., Newman, S., Olson, K.M. and Tait, R.G. (2013). Breeding and genetics symphosium: Systems biology in animal breeding: Identifying relationships among markers, genes, and phenotypes. Journal of Animal Science. 91(2): 521–522.
Fortes, M.R.S., Reverter, A., Nagaraj, S.H., Zhang, Y., Jonsson, N.N., Barris, W. et al. (2011). A single nucleotide polymorphism-derived regulatory gene network underlying puberty in 2 tropical breeds of beef cattle. Journal of Animal Science. 89:1669–1683.
Fortes, M.R., Reverter, A., Zhang, Y., Collis, E., Nagaraj, S.H., Jonsson, N., et al. (2010). Association weight matrix for the genetic dissection of puberty in beef cattle. In: Proceeding of National Acadic Science. USA 107:13642–13647.
Froman, D.P. and D.D. Rhoads. (2013). A systems biology definition for chicken semen quality. Jornal of Animal Science. 91:523–529.
Guifen, L., Xiaomu, L., Fachun, W., Xiuwen, T., Haijian, C. and Enliang, S. (2012). Use of a bovine genome chip to identify new biological pathways for beef quality in cattle. Molecular Biology Reproduction. 39(12):10979–86.
Hobert, O. (2008). Gene regulation by transcription Factors and microRNAs. Science. 277:1630-1635.
Horbelt, D., Denkis, A. and Knaus, P. (2012). A portrait of Transforming Growth Factor beta superfamily signalling: Background matters. The international journal of biochemistry & cell biology. 44(3): 469–474.
Jiang, H. and Ge, X. (2013). Mechanism of growth hormone stimulation of skeletal muscle growth in cattle. Journal of animal sience. 92(10): 21-29.
Kitano, H. (2000). Perspectives on systems biology. New Generation Computing. 18:199– 216.
Koltes, J.E., Tait, R. G, Fritz, E.R., Mishra, B.P., Van Eenennaam, A.L., Mateescu, R.G., et al. (2012). A systems-genetics analysis of bovine skeletal muscle iron content. Journal of Animal Science. 90(Suppl. 3):163 (Abstr.).
Kutmon, M., Van Iersel, M.P., Bohler, A., Kelder, T., Nunes, N., Pico, A.R. and Evelo, C.T. (2015). PathVisio 3: An Extendable Pathway Analysis Toolbox. PLoS Comput Biology. 11(2): e1004085.
Lee, S.H, Gondro, C., Van der Werf. J., Kim, N.K., Lim, D., Park, E.W., et al. (2010). Use of a bovine genome array to identify new biological pathways for beef marbling in Hanwoo (Korean Cattle). BMC Genomics. 11(1):1–11.
Nguyen, H.T., Ramstein, G., Leray, P. and Jacques,Y. (2009). Reconstruction of gene regulation networks from microarray data by Bayesian networks. Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM. 1: 42-46.
Reverter, A., and M. R. S. Fortes. 2013. Building single nucleotide polymorphism-derived gene regulatory networks: Towards functional genome wide association studies. Journal of Animal Science. 91:530–536.
Rosa, G. J. M., and B. D. Valente. 2013. Inferring causal effects from observational data in livestock. Journal of Animal Science. 91:553–564.
Roudbari, Z., Coort, S.L., Kutmon, M., Eijssen, L., Melius, J., Nassiri, M.M. et al. (2015). Pathway analysis of transcriptomics profiling as a key tool to improve beef cattle breeding in the meat-producing industry. In: Proceeding of Biosb confrance. Lunteren, Netherlands.
Roudbari, Z., Coort, SL., Kutmon, M., Eijssen, L., Nassiri, M.M., Evelo, C. (2015). Cellular signaling pathway analysis of transcriptomics profiling as a key tool to improve marbling in beef cattle. A possible approach for artificial meat quality improvement. In: 1st International Symposium on Cultured Meat. Mastrich, Netherlands.
Sadkowski, T., Ciecierska, A., Majewska, A., Oprzadek, J., Dasiewicz, K., Ollik, M., Wicik, Z. and Motyl, T. (2014). Transcriptional background of beef marbling - Novel genes implicated in intramuscular fat deposition, Meat Science. 97(1): 32–41.
Shlomi, T., Cabili, MN., Herrgard, M.J., Palsson, B., Ruppin, E. (2008). Network-based prediction of human tissue-specific metabolism. Nature Biotechnology. 26:1003–1010.
Snelling, W.M., Cushman, R.A., Keele, J.W., Maltecca, C., Thomas, M.G., Fortes, M.R.S. and Reverter. A. (2013). Networks and pathways to guide genomic selection. Journal of Animal Science. 91:537–552.
Van Iersel, M.P., Kelder, T., Pico, A.R., Hanspers, K., Coort, S., Conklin, B.R., and Evelo, C. (2008). Presenting and exploring biological pathways with PathVisio. BMC Bioinformatics. 9(1): 1–9.
)